Process of Analyzing eQTL Data¶
So far,
- Overview of Next Generation Sequencing
- Setting an iPlant account
- Uploading data to iPlant
- Intrdouction to iPlant Discovery Environment
- QC and cleaning sequence data
- Mapping of reads to the genome
- Assembling transcripts and estimating their abundances
Today,
- Introduction to iPlant Atmosphere
- Introduction to Terminal
- Doing down stream analysis in the Terminal